Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2AO43633 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CHMP2AO43633 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2AO43633 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP2AO43633 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2AO43633 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMP2AO43633 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2AO43633 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP2AO43633 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
CHMP2AO43633 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP2AO43633 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP2AO43633 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2AO43633 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CHMP2AO43633 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMP2AO43633 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP2AO43633 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP2AO43633 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.83■□□□□ 0.6
CHMP2AO43633 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP2AO43633 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHMP2AO43633 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP2AO43633 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP2AO43633 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP2AO43633 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP2AO43633 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CHMP2AO43633 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2AO43633 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP2AO43633 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP2AO43633 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHMP2AO43633 LINC00895-201ENST00000629028 1637 ntBASIC18.82■□□□□ 0.6
CHMP2AO43633 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP2AO43633 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP2AO43633 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 DNAJB3-202ENST00000449667 1266 ntBASIC18.82■□□□□ 0.6
CHMP2AO43633 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.82■□□□□ 0.6
CHMP2AO43633 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2AO43633 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMP2AO43633 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP2AO43633 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2AO43633 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHMP2AO43633 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2AO43633 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2AO43633 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 AL603756.1-201ENST00000606511 2163 ntBASIC18.81■□□□□ 0.6
CHMP2AO43633 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 AL355306.1-201ENST00000415580 579 ntBASIC18.81■□□□□ 0.6
CHMP2AO43633 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
CHMP2AO43633 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.81■□□□□ 0.6
CHMP2AO43633 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2AO43633 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2AO43633 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms