Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMAD6O43541 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.89■□□□□ 0.29
SMAD6O43541 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 AL139400.1-201ENST00000366220 510 ntBASIC16.89■□□□□ 0.29
SMAD6O43541 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.89■□□□□ 0.29
SMAD6O43541 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SMAD6O43541 METTL21AP1-201ENST00000438852 635 ntBASIC16.89■□□□□ 0.29
SMAD6O43541 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.89■□□□□ 0.29
SMAD6O43541 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.89■□□□□ 0.29
SMAD6O43541 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.89■□□□□ 0.29
SMAD6O43541 LINC01225-203ENST00000563550 1244 ntBASIC16.89■□□□□ 0.29
SMAD6O43541 AL138918.1-201ENST00000568306 659 ntBASIC16.89■□□□□ 0.29
SMAD6O43541 AL139011.1-202ENST00000642063 584 ntBASIC16.89■□□□□ 0.29
SMAD6O43541 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SMAD6O43541 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.89■□□□□ 0.29
SMAD6O43541 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMAD6O43541 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.89■□□□□ 0.29
SMAD6O43541 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD6O43541 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.89■□□□□ 0.29
SMAD6O43541 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SMAD6O43541 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 AL627223.1-201ENST00000416693 442 ntBASIC16.88■□□□□ 0.29
SMAD6O43541 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 FAM58DP-201ENST00000428076 619 ntBASIC16.88■□□□□ 0.29
SMAD6O43541 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC069335.1-201ENST00000489972 472 ntBASIC16.88■□□□□ 0.29
SMAD6O43541 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.88■□□□□ 0.29
SMAD6O43541 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.88■□□□□ 0.29
SMAD6O43541 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.88■□□□□ 0.29
SMAD6O43541 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SMAD6O43541 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD6O43541 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.88■□□□□ 0.29
SMAD6O43541 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 UBALD1-205ENST00000590891 2641 ntBASIC16.87■□□□□ 0.29
SMAD6O43541 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 PMS2P2-201ENST00000425039 1128 ntBASIC16.87■□□□□ 0.29
SMAD6O43541 AC005237.2-201ENST00000434368 219 ntBASIC16.87■□□□□ 0.29
SMAD6O43541 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMAD6O43541 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMAD6O43541 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.87■□□□□ 0.29
SMAD6O43541 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.87■□□□□ 0.29
SMAD6O43541 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMAD6O43541 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms