Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNQ3O43525 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNQ3O43525 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
KCNQ3O43525 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.33■■□□□ 1.01
KCNQ3O43525 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
KCNQ3O43525 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.33■■□□□ 1.01
KCNQ3O43525 RNF216P1-203ENST00000404404 2427 ntBASIC21.33■■□□□ 1.01
KCNQ3O43525 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNQ3O43525 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.33■■□□□ 1.01
KCNQ3O43525 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNQ3O43525 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KCNQ3O43525 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.33■■□□□ 1.01
KCNQ3O43525 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.33■■□□□ 1.01
KCNQ3O43525 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
KCNQ3O43525 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
KCNQ3O43525 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.33■■□□□ 1
KCNQ3O43525 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.33■■□□□ 1
KCNQ3O43525 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
KCNQ3O43525 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
KCNQ3O43525 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
KCNQ3O43525 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
KCNQ3O43525 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.32■■□□□ 1
KCNQ3O43525 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 AC015922.1-201ENST00000421102 1152 ntBASIC21.32■■□□□ 1
KCNQ3O43525 AC241585.1-201ENST00000433527 519 ntBASIC21.32■■□□□ 1
KCNQ3O43525 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.32■■□□□ 1
KCNQ3O43525 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.32■■□□□ 1
KCNQ3O43525 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.32■■□□□ 1
KCNQ3O43525 AC008761.3-201ENST00000624803 892 ntBASIC21.32■■□□□ 1
KCNQ3O43525 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.32■■□□□ 1
KCNQ3O43525 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
KCNQ3O43525 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
KCNQ3O43525 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ3O43525 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.32■■□□□ 1
KCNQ3O43525 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.32■■□□□ 1
KCNQ3O43525 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.32■■□□□ 1
KCNQ3O43525 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
KCNQ3O43525 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 FAM220BP-201ENST00000377689 816 ntBASIC21.31■■□□□ 1
KCNQ3O43525 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 HLA-H-201ENST00000383620 1096 ntBASIC21.31■■□□□ 1
KCNQ3O43525 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
KCNQ3O43525 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 SERBP1P5-201ENST00000510079 1181 ntBASIC21.31■■□□□ 1
KCNQ3O43525 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.31■■□□□ 1
KCNQ3O43525 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.31■■□□□ 1
KCNQ3O43525 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ3O43525 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ3O43525 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ3O43525 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ3O43525 AL031731.1-201ENST00000642131 2094 ntBASIC21.31■■□□□ 1
KCNQ3O43525 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ3O43525 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ3O43525 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ3O43525 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.3■■□□□ 1
KCNQ3O43525 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.3■■□□□ 1
KCNQ3O43525 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ3O43525 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms