Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CHD1O14646 ADM-202ENST00000524948 584 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC26.54■■□□□ 1.84
CHD1O14646 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 AL589702.1-201ENST00000641229 1509 ntBASIC26.54■■□□□ 1.84
CHD1O14646 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD1O14646 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CHD1O14646 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC26.53■■□□□ 1.84
CHD1O14646 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC26.53■■□□□ 1.84
CHD1O14646 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC26.53■■□□□ 1.84
CHD1O14646 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC26.53■■□□□ 1.84
CHD1O14646 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC26.53■■□□□ 1.84
CHD1O14646 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC26.53■■□□□ 1.84
CHD1O14646 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC26.53■■□□□ 1.84
CHD1O14646 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC26.53■■□□□ 1.84
CHD1O14646 MIR5572-201ENST00000583188 137 ntBASIC26.53■■□□□ 1.84
CHD1O14646 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC26.53■■□□□ 1.84
CHD1O14646 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC26.53■■□□□ 1.84
CHD1O14646 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD1O14646 AC091046.1-201ENST00000331871 207 ntBASIC26.53■■□□□ 1.84
CHD1O14646 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC26.53■■□□□ 1.84
CHD1O14646 AP001258.2-201ENST00000529891 490 ntBASIC26.53■■□□□ 1.84
CHD1O14646 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
CHD1O14646 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CHD1O14646 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC26.53■■□□□ 1.84
CHD1O14646 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC26.53■■□□□ 1.84
CHD1O14646 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CHD1O14646 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
CHD1O14646 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC26.52■■□□□ 1.84
CHD1O14646 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC26.52■■□□□ 1.84
CHD1O14646 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC26.52■■□□□ 1.84
CHD1O14646 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CHD1O14646 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC26.52■■□□□ 1.84
CHD1O14646 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC26.52■■□□□ 1.84
CHD1O14646 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC26.52■■□□□ 1.84
CHD1O14646 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC26.52■■□□□ 1.84
CHD1O14646 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC26.52■■□□□ 1.84
CHD1O14646 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD1O14646 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD1O14646 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CHD1O14646 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD1O14646 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHD1O14646 MTX1P1-201ENST00000440904 838 ntBASIC26.51■■□□□ 1.83
CHD1O14646 AL139010.1-201ENST00000454878 894 ntBASIC26.51■■□□□ 1.83
CHD1O14646 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD1O14646 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHD1O14646 AC138028.6-201ENST00000616106 1482 ntBASIC26.51■■□□□ 1.83
CHD1O14646 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CHD1O14646 CYP4F24P-201ENST00000586049 1580 ntBASIC26.51■■□□□ 1.83
CHD1O14646 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD1O14646 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD1O14646 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC26.51■■□□□ 1.83
CHD1O14646 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
CHD1O14646 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC26.51■■□□□ 1.83
CHD1O14646 TIMM17BP1-201ENST00000545713 516 ntBASIC26.51■■□□□ 1.83
CHD1O14646 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC26.51■■□□□ 1.83
CHD1O14646 AC097724.1-201ENST00000609581 426 ntBASIC26.51■■□□□ 1.83
CHD1O14646 HADH-212ENST00000638621 741 ntTSL 5 BASIC26.51■■□□□ 1.83
CHD1O14646 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHD1O14646 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC26.5■■□□□ 1.83
CHD1O14646 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
CHD1O14646 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC26.5■■□□□ 1.83
CHD1O14646 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC26.5■■□□□ 1.83
CHD1O14646 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CHD1O14646 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHD1O14646 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CHD1O14646 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC26.5■■□□□ 1.83
CHD1O14646 AC120045.2-201ENST00000567334 178 ntBASIC26.5■■□□□ 1.83
CHD1O14646 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC26.5■■□□□ 1.83
CHD1O14646 AC008687.7-202ENST00000637404 953 ntBASIC26.5■■□□□ 1.83
CHD1O14646 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC26.5■■□□□ 1.83
CHD1O14646 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC26.5■■□□□ 1.83
CHD1O14646 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms