Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
UBFD1O14562 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 SLC22A20-204ENST00000530038 1673 ntBASIC16.29■□□□□ 0.2
UBFD1O14562 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.29■□□□□ 0.2
UBFD1O14562 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.29■□□□□ 0.2
UBFD1O14562 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBFD1O14562 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBFD1O14562 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
UBFD1O14562 AC105917.1-201ENST00000506637 2539 ntBASIC16.28■□□□□ 0.2
UBFD1O14562 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.28■□□□□ 0.2
UBFD1O14562 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
UBFD1O14562 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.28■□□□□ 0.2
UBFD1O14562 KRT18P31-201ENST00000506277 1292 ntBASIC16.28■□□□□ 0.2
UBFD1O14562 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 AC139887.3-201ENST00000568585 713 ntBASIC16.28■□□□□ 0.2
UBFD1O14562 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.28■□□□□ 0.2
UBFD1O14562 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.28■□□□□ 0.2
UBFD1O14562 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.28■□□□□ 0.2
UBFD1O14562 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBFD1O14562 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBFD1O14562 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.27■□□□□ 0.2
UBFD1O14562 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.27■□□□□ 0.2
UBFD1O14562 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 AC006504.4-201ENST00000592118 1568 ntBASIC16.27■□□□□ 0.2
UBFD1O14562 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBFD1O14562 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.27■□□□□ 0.2
UBFD1O14562 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
UBFD1O14562 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.27■□□□□ 0.2
UBFD1O14562 PMS2P1-201ENST00000431037 1228 ntBASIC16.27■□□□□ 0.2
UBFD1O14562 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.27■□□□□ 0.2
UBFD1O14562 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.27■□□□□ 0.2
UBFD1O14562 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.27■□□□□ 0.2
UBFD1O14562 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBFD1O14562 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBFD1O14562 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
UBFD1O14562 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBFD1O14562 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBFD1O14562 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
UBFD1O14562 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
UBFD1O14562 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBFD1O14562 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
UBFD1O14562 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBFD1O14562 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
UBFD1O14562 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.27■□□□□ 0.19
UBFD1O14562 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBFD1O14562 AL603832.2-201ENST00000566195 2125 ntBASIC16.27■□□□□ 0.19
UBFD1O14562 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
UBFD1O14562 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBFD1O14562 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
UBFD1O14562 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
UBFD1O14562 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms