Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3B1O00203 SLC25A6P2-201ENST00000497974 877 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 RNPS1P1-201ENST00000507437 918 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3B1O00203 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3B1O00203 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.96■□□□□ 0.31
AP3B1O00203 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3B1O00203 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 AC008735.5-201ENST00000623544 497 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 GGT3P-204ENST00000453783 1664 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.96■□□□□ 0.31
AP3B1O00203 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3B1O00203 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
AP3B1O00203 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3B1O00203 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3B1O00203 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.96■□□□□ 0.3
AP3B1O00203 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
AP3B1O00203 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AP3B1O00203 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.96■□□□□ 0.3
AP3B1O00203 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.96■□□□□ 0.3
AP3B1O00203 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3B1O00203 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.95■□□□□ 0.3
AP3B1O00203 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
AP3B1O00203 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.95■□□□□ 0.3
AP3B1O00203 MTHFR-217ENST00000641820 1569 ntBASIC16.95■□□□□ 0.3
AP3B1O00203 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
AP3B1O00203 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AP3B1O00203 AF186996.4-201ENST00000467186 377 ntBASIC16.95■□□□□ 0.3
AP3B1O00203 KRT18P56-201ENST00000507275 550 ntBASIC16.95■□□□□ 0.3
AP3B1O00203 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.95■□□□□ 0.3
AP3B1O00203 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.95■□□□□ 0.3
AP3B1O00203 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.95■□□□□ 0.3
AP3B1O00203 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3B1O00203 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
AP3B1O00203 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3B1O00203 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3B1O00203 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3B1O00203 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 UBALD1-205ENST00000590891 2641 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 RPS2P1-201ENST00000434010 821 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 IGHV3-65-201ENST00000523210 341 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 AC105339.3-201ENST00000560043 636 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.94■□□□□ 0.3
AP3B1O00203 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.94■□□□□ 0.3
AP3B1O00203 CYP2A7P1-201ENST00000595391 815 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 AC005593.1-201ENST00000624894 515 ntBASIC16.94■□□□□ 0.3
AP3B1O00203 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3B1O00203 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
AP3B1O00203 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3B1O00203 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3B1O00203 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms