Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SPDYE11-202ENST00000450699 704 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 TIMM8BP1-201ENST00000452384 211 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 RN7SL589P-201ENST00000481268 310 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SPDYE9P-201ENST00000570642 692 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 AL596442.2-201ENST00000610240 980 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 SPDYE10P-202ENST00000612005 668 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SPDYE8P-202ENST00000612377 668 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.3■□□□□ 0.68
PALM3A6NDB9 GGT4P-201ENST00000623672 1708 ntBASIC19.3■□□□□ 0.68
PALM3A6NDB9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PALM3A6NDB9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 CNN2P11-201ENST00000429351 262 ntBASIC19.29■□□□□ 0.68
PALM3A6NDB9 SPCS2P4-201ENST00000436160 681 ntBASIC19.29■□□□□ 0.68
PALM3A6NDB9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 AC093520.2-201ENST00000561830 333 ntBASIC19.29■□□□□ 0.68
PALM3A6NDB9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 FLJ38576-201ENST00000623820 2459 ntBASIC19.29■□□□□ 0.68
PALM3A6NDB9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
PALM3A6NDB9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PALM3A6NDB9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 AC079781.4-201ENST00000641908 219 ntBASIC19.28■□□□□ 0.68
PALM3A6NDB9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PALM3A6NDB9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PALM3A6NDB9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms