Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC100756.1-201ENST00000562736 682 ntBASIC22.42■■□□□ 1.18
SBNO1A3KN83 AC138749.3-201ENST00000567691 622 ntBASIC22.42■■□□□ 1.18
SBNO1A3KN83 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 AC116165.1-201ENST00000611806 668 ntBASIC22.42■■□□□ 1.18
SBNO1A3KN83 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SBNO1A3KN83 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SBNO1A3KN83 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 MYCLP2-201ENST00000449268 967 ntBASIC22.41■■□□□ 1.18
SBNO1A3KN83 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 NEU3-203ENST00000529024 581 ntTSL 3 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 TPRX2P-201ENST00000535362 881 ntBASIC22.41■■□□□ 1.18
SBNO1A3KN83 SNX29P1-201ENST00000548357 1007 ntBASIC22.41■■□□□ 1.18
SBNO1A3KN83 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC22.41■■□□□ 1.18
SBNO1A3KN83 AC004461.2-201ENST00000629517 803 ntBASIC22.41■■□□□ 1.18
SBNO1A3KN83 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.41■■□□□ 1.18
SBNO1A3KN83 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SBNO1A3KN83 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 AP005482.1-201ENST00000563722 1273 ntBASIC22.4■■□□□ 1.18
SBNO1A3KN83 RPS15-212ENST00000593052 629 ntTSL 2 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 COX11-210ENST00000639671 696 ntBASIC22.4■■□□□ 1.18
SBNO1A3KN83 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.4■■□□□ 1.18
SBNO1A3KN83 TUBB8P12-201ENST00000308911 1335 ntBASIC22.4■■□□□ 1.18
SBNO1A3KN83 TUBB7P-202ENST00000428444 1305 ntBASIC22.4■■□□□ 1.18
SBNO1A3KN83 TUBB8P7-204ENST00000567960 1332 ntBASIC22.4■■□□□ 1.18
SBNO1A3KN83 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SBNO1A3KN83 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SBNO1A3KN83 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SBNO1A3KN83 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 AC098850.1-201ENST00000419919 790 ntBASIC22.39■■□□□ 1.18
SBNO1A3KN83 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 SDHAP3-202ENST00000515467 728 ntBASIC22.39■■□□□ 1.18
SBNO1A3KN83 AC123567.1-201ENST00000548294 1261 ntBASIC22.39■■□□□ 1.18
SBNO1A3KN83 MIR4525-201ENST00000580000 75 ntBASIC22.39■■□□□ 1.18
SBNO1A3KN83 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC22.39■■□□□ 1.18
SBNO1A3KN83 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SBNO1A3KN83 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SBNO1A3KN83 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC22.39■■□□□ 1.17
SBNO1A3KN83 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.39■■□□□ 1.17
SBNO1A3KN83 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC22.39■■□□□ 1.17
SBNO1A3KN83 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.39■■□□□ 1.17
SBNO1A3KN83 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SBNO1A3KN83 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms