Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HFM1A2PYH4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
HFM1A2PYH4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 AL035633.1-201ENST00000406139 838 ntBASIC24.53■■□□□ 1.52
HFM1A2PYH4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 AC092364.2-202ENST00000597012 1073 ntBASIC24.53■■□□□ 1.52
HFM1A2PYH4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
HFM1A2PYH4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.53■■□□□ 1.52
HFM1A2PYH4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 TUBB3P1-201ENST00000405796 1332 ntBASIC24.52■■□□□ 1.52
HFM1A2PYH4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 HNRNPFP1-201ENST00000391730 1133 ntBASIC24.52■■□□□ 1.52
HFM1A2PYH4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HFM1A2PYH4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC24.52■■□□□ 1.52
HFM1A2PYH4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 AC011676.5-201ENST00000624864 2660 ntBASIC24.51■■□□□ 1.51
HFM1A2PYH4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 LINC01144-201ENST00000626198 1710 ntBASIC24.51■■□□□ 1.51
HFM1A2PYH4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC24.51■■□□□ 1.51
HFM1A2PYH4 AC140878.1-201ENST00000565277 250 ntBASIC24.51■■□□□ 1.51
HFM1A2PYH4 AC018529.1-201ENST00000613063 361 ntBASIC24.51■■□□□ 1.51
HFM1A2PYH4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HFM1A2PYH4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 AC107890.1-201ENST00000422478 521 ntBASIC24.5■■□□□ 1.51
HFM1A2PYH4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC24.5■■□□□ 1.51
HFM1A2PYH4 AL158211.3-201ENST00000607385 239 ntBASIC24.5■■□□□ 1.51
HFM1A2PYH4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
HFM1A2PYH4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AC092171.3-201ENST00000610122 2651 ntBASIC24.49■■□□□ 1.51
HFM1A2PYH4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AD000864.1-201ENST00000624076 2295 ntBASIC24.49■■□□□ 1.51
HFM1A2PYH4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms