Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 BCAR1-209ENST00000546196 1340 ntBASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 ALG1L5P-201ENST00000482043 771 ntBASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 AC005829.1-201ENST00000570002 483 ntBASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 AC004877.2-201ENST00000623941 599 ntBASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPDC1A2A3K4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AC211486.1-202ENST00000416371 468 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 SLC25A6P2-201ENST00000497974 877 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AC211476.1-201ENST00000503899 468 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AC096734.2-201ENST00000562054 433 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AP001160.2-201ENST00000596071 487 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AC079781.4-201ENST00000641908 219 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 TOP3BP1-201ENST00000420768 1380 ntBASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PTPDC1A2A3K4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPDC1A2A3K4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms