Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AL590787.1-201ENST00000568856 1315 ntBASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 FAAHP1-202ENST00000446499 1238 ntBASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 EMBP1-201ENST00000458200 901 ntBASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 PCDHB17P-201ENST00000539533 2393 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 KRT126P-201ENST00000549467 1181 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 RN7SL510P-201ENST00000581311 263 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AC004706.3-202ENST00000621574 984 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 AC107918.4-202ENST00000641623 219 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 FLJ16779-201ENST00000612722 7638 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 TSPY26P-202ENST00000565928 3884 ntBASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HLA-DRB4X5D2U9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms