Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 KRT8P39-201ENST00000396270 1433 ntBASIC19.16■□□□□ 0.66
CLIC4Q9Y696 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLIC4Q9Y696 AP002414.3-201ENST00000589352 1468 ntBASIC19.16■□□□□ 0.66
CLIC4Q9Y696 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 FAM197Y8-203ENST00000450145 560 ntBASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AC018712.1-201ENST00000455767 687 ntBASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AC073648.2-201ENST00000510116 352 ntBASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AC136632.2-201ENST00000512891 861 ntBASIC19.15■□□□□ 0.66
CLIC4Q9Y696 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 AL513523.2-202ENST00000427283 2040 ntBASIC19.15■□□□□ 0.66
CLIC4Q9Y696 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC4Q9Y696 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CLIC4Q9Y696 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC4Q9Y696 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC4Q9Y696 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC4Q9Y696 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC4Q9Y696 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 AL691432.3-201ENST00000621860 400 ntBASIC19.14■□□□□ 0.65
CLIC4Q9Y696 AC008735.5-201ENST00000623544 497 ntBASIC19.14■□□□□ 0.65
CLIC4Q9Y696 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.14■□□□□ 0.65
CLIC4Q9Y696 AC008894.3-201ENST00000624324 3103 ntBASIC19.14■□□□□ 0.65
CLIC4Q9Y696 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC4Q9Y696 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms