Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 OR6D1P-202ENST00000641007 5290 ntBASIC17.43■□□□□ 0.38
YIPF1Q9Y548 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YIPF1Q9Y548 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 HLA-H-201ENST00000383620 1096 ntBASIC17.42■□□□□ 0.38
YIPF1Q9Y548 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 UGT1A2P-201ENST00000454886 866 ntBASIC17.42■□□□□ 0.38
YIPF1Q9Y548 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AC138761.1-201ENST00000584393 385 ntBASIC17.42■□□□□ 0.38
YIPF1Q9Y548 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AC003101.2-201ENST00000612557 442 ntBASIC17.42■□□□□ 0.38
YIPF1Q9Y548 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.42■□□□□ 0.38
YIPF1Q9Y548 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 AC139713.2-201ENST00000641328 2723 ntBASIC17.41■□□□□ 0.38
YIPF1Q9Y548 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
YIPF1Q9Y548 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 AL391256.1-201ENST00000443260 1855 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 MIR661-201ENST00000384842 89 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 COX20P2-201ENST00000452636 358 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 AC007967.4-201ENST00000614700 386 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 AC073592.8-201ENST00000624126 511 ntBASIC17.4■□□□□ 0.38
YIPF1Q9Y548 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YIPF1Q9Y548 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms