Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA1Q9UND3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 AD000864.1-201ENST00000624076 2295 ntBASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA1Q9UND3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 LINC02012-201ENST00000608206 1725 ntBASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 AL645939.2-201ENST00000427340 991 ntBASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 PAWRP1-201ENST00000451083 565 ntBASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA1Q9UND3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NPIPA1Q9UND3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms