Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
RIMBP3Q9UFD9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 AC011491.1-203ENST00000637688 543 ntBASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIMBP3Q9UFD9 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 MIR769-201ENST00000390225 118 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 NPM1P43-201ENST00000558669 786 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 Z97205.2-201ENST00000564697 1639 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AL133466.1-201ENST00000447582 150 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AC009486.1-201ENST00000569860 813 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 AL353726.2-201ENST00000623259 884 ntBASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RIMBP3Q9UFD9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 RN7SL181P-201ENST00000462921 277 ntBASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 AC141586.1-203ENST00000567242 366 ntBASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 AC138649.2-201ENST00000615886 705 ntBASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 KRT8P49-201ENST00000604166 1432 ntBASIC26.02■■□□□ 1.76
RIMBP3Q9UFD9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
RIMBP3Q9UFD9 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.01■■□□□ 1.76
RIMBP3Q9UFD9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC26.01■■□□□ 1.76
RIMBP3Q9UFD9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RIMBP3Q9UFD9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms