Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AL355306.1-201ENST00000415580 579 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AL671277.1-201ENST00000429656 993 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC140658.5-201ENST00000438532 169 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC011467.4-201ENST00000594891 528 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC026120.1-201ENST00000611536 926 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 LINC00628-201ENST00000628516 1289 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 AC105020.1-201ENST00000435356 2205 ntBASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC6Q9UBN7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 KRT8P48-201ENST00000515599 1220 ntBASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 AC025678.2-201ENST00000562061 970 ntBASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 AL645728.2-201ENST00000641974 660 ntBASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 PCDHA14-201ENST00000506751 2298 ntBASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDAC6Q9UBN7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 SPCS2P1-201ENST00000561636 679 ntBASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC6Q9UBN7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms