Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 SPDYE7P-202ENST00000420373 878 ntBASIC18.85■□□□□ 0.61
COL20A1Q9P218 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 MIR3197-201ENST00000582241 73 ntBASIC18.85■□□□□ 0.61
COL20A1Q9P218 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL20A1Q9P218 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.85■□□□□ 0.61
COL20A1Q9P218 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AC093214.1-201ENST00000511688 1107 ntBASIC18.84■□□□□ 0.61
COL20A1Q9P218 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AC140878.1-201ENST00000565277 250 ntBASIC18.84■□□□□ 0.61
COL20A1Q9P218 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AL031731.1-201ENST00000642131 2094 ntBASIC18.84■□□□□ 0.61
COL20A1Q9P218 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.84■□□□□ 0.61
COL20A1Q9P218 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL20A1Q9P218 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL20A1Q9P218 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL20A1Q9P218 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL20A1Q9P218 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL20A1Q9P218 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.83■□□□□ 0.61
COL20A1Q9P218 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL20A1Q9P218 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 AC092580.3-201ENST00000430932 139 ntBASIC18.83■□□□□ 0.6
COL20A1Q9P218 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.83■□□□□ 0.6
COL20A1Q9P218 GGT4P-201ENST00000623672 1708 ntBASIC18.83■□□□□ 0.6
COL20A1Q9P218 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL20A1Q9P218 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.82■□□□□ 0.6
COL20A1Q9P218 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL20A1Q9P218 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms