Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.02■□□□□ 0.32
HACD3Q9P035 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HACD3Q9P035 SLC25A6P2-201ENST00000497974 877 ntBASIC17.02■□□□□ 0.32
HACD3Q9P035 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.02■□□□□ 0.32
HACD3Q9P035 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
HACD3Q9P035 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.02■□□□□ 0.32
HACD3Q9P035 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 REXO1L3P-201ENST00000622202 1288 ntBASIC17.02■□□□□ 0.32
HACD3Q9P035 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HACD3Q9P035 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HACD3Q9P035 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HACD3Q9P035 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
HACD3Q9P035 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HACD3Q9P035 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HACD3Q9P035 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HACD3Q9P035 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HACD3Q9P035 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HACD3Q9P035 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HACD3Q9P035 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HACD3Q9P035 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.01■□□□□ 0.31
HACD3Q9P035 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
HACD3Q9P035 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.01■□□□□ 0.31
HACD3Q9P035 PRSS29P-201ENST00000440800 595 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 AC108751.1-201ENST00000490852 363 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 IGHV3-22-201ENST00000520721 359 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.01■□□□□ 0.31
HACD3Q9P035 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 AC091167.2-201ENST00000579581 588 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 AC010654.1-201ENST00000615722 808 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HACD3Q9P035 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HACD3Q9P035 AC005915.1-201ENST00000624912 2018 ntBASIC17.01■□□□□ 0.31
HACD3Q9P035 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HACD3Q9P035 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.01■□□□□ 0.31
HACD3Q9P035 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17■□□□□ 0.31
HACD3Q9P035 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17■□□□□ 0.31
HACD3Q9P035 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17■□□□□ 0.31
HACD3Q9P035 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17■□□□□ 0.31
HACD3Q9P035 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17■□□□□ 0.31
HACD3Q9P035 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17■□□□□ 0.31
HACD3Q9P035 CD63-204ENST00000546939 779 ntTSL 3 BASIC17■□□□□ 0.31
HACD3Q9P035 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17■□□□□ 0.31
HACD3Q9P035 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17■□□□□ 0.31
HACD3Q9P035 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HACD3Q9P035 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17■□□□□ 0.31
HACD3Q9P035 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17■□□□□ 0.31
HACD3Q9P035 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
HACD3Q9P035 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17■□□□□ 0.31
HACD3Q9P035 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17■□□□□ 0.31
HACD3Q9P035 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17■□□□□ 0.31
HACD3Q9P035 LINC00895-201ENST00000629028 1637 ntBASIC16.99■□□□□ 0.31
HACD3Q9P035 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HACD3Q9P035 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
HACD3Q9P035 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HACD3Q9P035 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms