Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 AC006277.1-201ENST00000624348 1610 ntBASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 LINC00895-201ENST00000629028 1637 ntBASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 SNX33P1-201ENST00000592116 1762 ntBASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM7Q9NR12 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CYP2A7P1-201ENST00000595391 815 ntBASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM7Q9NR12 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AL645728.1-201ENST00000366221 2101 ntBASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms