Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AL031731.1-201ENST00000642131 2094 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AP002414.3-201ENST00000589352 1468 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AL450487.1-201ENST00000426799 995 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 FAM215A-202ENST00000632077 792 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 MTHFR-217ENST00000641820 1569 ntBASIC16.04■□□□□ 0.16
BRF2Q9HAW0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
BRF2Q9HAW0 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.03■□□□□ 0.16
BRF2Q9HAW0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 GGT4P-201ENST00000623672 1708 ntBASIC16.03■□□□□ 0.16
BRF2Q9HAW0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.03■□□□□ 0.16
BRF2Q9HAW0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 AC079781.3-201ENST00000449110 356 ntBASIC16.03■□□□□ 0.16
BRF2Q9HAW0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 AL773604.1-201ENST00000617417 272 ntBASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRF2Q9HAW0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.02■□□□□ 0.16
BRF2Q9HAW0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms