Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VRK1Q99986 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.92□□□□□ -0.02
VRK1Q99986 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 AL049757.1-201ENST00000616842 1596 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 AL353593.2-201ENST00000602529 1483 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.91□□□□□ -0.02
VRK1Q99986 SIGLEC30P-201ENST00000455569 941 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 STK19B-204ENST00000512515 211 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 RNA5SP415-201ENST00000517246 115 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 AC006557.2-201ENST00000592985 1240 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 AL671883.3-201ENST00000603274 991 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VRK1Q99986 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.91□□□□□ -0.02
VRK1Q99986 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.91□□□□□ -0.02
VRK1Q99986 PMS2P7-201ENST00000506558 1336 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VRK1Q99986 HYMAI-201ENST00000635591 3347 ntBASIC14.91□□□□□ -0.02
VRK1Q99986 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 AC003669.1-201ENST00000334569 611 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 IGHV3-22-201ENST00000520721 359 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.9□□□□□ -0.02
VRK1Q99986 AC092865.5-201ENST00000545435 363 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.9□□□□□ -0.02
VRK1Q99986 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 AC005593.1-201ENST00000624894 515 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.9□□□□□ -0.02
VRK1Q99986 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
VRK1Q99986 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VRK1Q99986 SIGLEC16-201ENST00000599858 1437 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VRK1Q99986 AC063926.3-201ENST00000624734 5658 ntBASIC14.9□□□□□ -0.02
VRK1Q99986 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 AC132938.5-201ENST00000624980 1813 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.89□□□□□ -0.03
VRK1Q99986 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.89□□□□□ -0.03
VRK1Q99986 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.89□□□□□ -0.03
VRK1Q99986 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VRK1Q99986 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
VRK1Q99986 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VRK1Q99986 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.89□□□□□ -0.03
VRK1Q99986 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms