Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN18Q99952 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN18Q99952 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN18Q99952 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 ACTBP11-201ENST00000436287 1126 ntBASIC18.99■□□□□ 0.63
PTPN18Q99952 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.99■□□□□ 0.63
PTPN18Q99952 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.99■□□□□ 0.63
PTPN18Q99952 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.99■□□□□ 0.63
PTPN18Q99952 MIR8072-201ENST00000614241 80 ntBASIC18.99■□□□□ 0.63
PTPN18Q99952 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN18Q99952 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN18Q99952 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.99■□□□□ 0.63
PTPN18Q99952 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN18Q99952 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN18Q99952 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN18Q99952 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN18Q99952 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPN18Q99952 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN18Q99952 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN18Q99952 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN18Q99952 TMEM261P1-201ENST00000604899 340 ntBASIC18.98■□□□□ 0.63
PTPN18Q99952 RPSAP52-203ENST00000622976 1023 ntBASIC18.98■□□□□ 0.63
PTPN18Q99952 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN18Q99952 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPN18Q99952 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN18Q99952 SNX33P1-201ENST00000592116 1762 ntBASIC18.98■□□□□ 0.63
PTPN18Q99952 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN18Q99952 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN18Q99952 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPN18Q99952 CDC14C-201ENST00000428251 1719 ntBASIC18.97■□□□□ 0.63
PTPN18Q99952 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 NOC2LP1-202ENST00000452600 2235 ntBASIC18.97■□□□□ 0.63
PTPN18Q99952 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN18Q99952 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN18Q99952 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN18Q99952 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN18Q99952 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN18Q99952 AC061975.2-201ENST00000581722 295 ntBASIC18.97■□□□□ 0.63
PTPN18Q99952 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN18Q99952 MIR6787-201ENST00000616675 61 ntBASIC18.97■□□□□ 0.63
PTPN18Q99952 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN18Q99952 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN18Q99952 AC006277.1-201ENST00000624348 1610 ntBASIC18.96■□□□□ 0.63
PTPN18Q99952 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN18Q99952 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PTPN18Q99952 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PTPN18Q99952 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN18Q99952 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 MIR1908-201ENST00000410394 80 ntBASIC18.96■□□□□ 0.63
PTPN18Q99952 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN18Q99952 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 AC104989.1-201ENST00000519711 778 ntBASIC18.96■□□□□ 0.63
PTPN18Q99952 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PTPN18Q99952 AL583810.1-201ENST00000553344 1045 ntBASIC18.96■□□□□ 0.63
PTPN18Q99952 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 AL033527.5-201ENST00000641382 801 ntBASIC18.96■□□□□ 0.63
PTPN18Q99952 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms