Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TOP3BP1-201ENST00000420768 1380 ntBASIC15.32■□□□□ 0.04
NPAS1Q99742 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPAS1Q99742 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS1Q99742 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS1Q99742 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
NPAS1Q99742 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
NPAS1Q99742 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS1Q99742 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 AC027601.4-201ENST00000611259 610 ntBASIC15.31■□□□□ 0.04
NPAS1Q99742 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS1Q99742 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS1Q99742 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS1Q99742 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS1Q99742 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPAS1Q99742 AC079328.2-201ENST00000561241 3354 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPAS1Q99742 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPAS1Q99742 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS1Q99742 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.3■□□□□ 0.04
NPAS1Q99742 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS1Q99742 KRT18P3-201ENST00000451602 1288 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.3■□□□□ 0.04
NPAS1Q99742 PGAM5P1-201ENST00000518923 814 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS1Q99742 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.3■□□□□ 0.04
NPAS1Q99742 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS1Q99742 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS1Q99742 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AL603756.1-201ENST00000606511 2163 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS1Q99742 AL671710.1-201ENST00000610245 2349 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AL513190.1-201ENST00000621254 727 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NPAS1Q99742 AC092865.6-201ENST00000642101 219 ntBASIC15.3■□□□□ 0.04
NPAS1Q99742 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS1Q99742 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms