Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 AL662890.1-201ENST00000396818 632 ntBASIC14.45□□□□□ -0.1
COL12A1Q99715 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 AL627389.1-201ENST00000413508 1182 ntBASIC14.45□□□□□ -0.1
COL12A1Q99715 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.45□□□□□ -0.1
COL12A1Q99715 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.45□□□□□ -0.1
COL12A1Q99715 AC104784.1-201ENST00000473096 294 ntBASIC14.45□□□□□ -0.1
COL12A1Q99715 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.45□□□□□ -0.1
COL12A1Q99715 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COL12A1Q99715 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.45□□□□□ -0.1
COL12A1Q99715 AL589987.1-201ENST00000453380 819 ntBASIC14.45□□□□□ -0.1
COL12A1Q99715 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.45□□□□□ -0.1
COL12A1Q99715 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.45□□□□□ -0.1
COL12A1Q99715 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.45□□□□□ -0.1
COL12A1Q99715 CASP16P-204ENST00000635032 809 ntBASIC14.45□□□□□ -0.1
COL12A1Q99715 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL12A1Q99715 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.45□□□□□ -0.1
COL12A1Q99715 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
COL12A1Q99715 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 SLC25A24P2-201ENST00000415059 510 ntBASIC14.44□□□□□ -0.1
COL12A1Q99715 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.44□□□□□ -0.1
COL12A1Q99715 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
COL12A1Q99715 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.44□□□□□ -0.1
COL12A1Q99715 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.44□□□□□ -0.1
COL12A1Q99715 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.44□□□□□ -0.1
COL12A1Q99715 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.44□□□□□ -0.1
COL12A1Q99715 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.44□□□□□ -0.1
COL12A1Q99715 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 LINC00895-201ENST00000629028 1637 ntBASIC14.44□□□□□ -0.1
COL12A1Q99715 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COL12A1Q99715 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL12A1Q99715 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.44□□□□□ -0.1
COL12A1Q99715 DUX4L45-201ENST00000566406 1057 ntBASIC14.44□□□□□ -0.1
COL12A1Q99715 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.44□□□□□ -0.1
COL12A1Q99715 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 EGFEM1P-202ENST00000431685 1563 ntBASIC14.44□□□□□ -0.1
COL12A1Q99715 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL12A1Q99715 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
COL12A1Q99715 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.43□□□□□ -0.1
COL12A1Q99715 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.43□□□□□ -0.1
COL12A1Q99715 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.43□□□□□ -0.1
COL12A1Q99715 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.43□□□□□ -0.1
COL12A1Q99715 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.43□□□□□ -0.1
COL12A1Q99715 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.43□□□□□ -0.1
COL12A1Q99715 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.43□□□□□ -0.1
COL12A1Q99715 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.43□□□□□ -0.1
COL12A1Q99715 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.43□□□□□ -0.1
COL12A1Q99715 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL12A1Q99715 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms