Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.93□□□□□ -0.02
SPENQ96T58 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
SPENQ96T58 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPENQ96T58 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SPENQ96T58 AC092658.1-201ENST00000505836 891 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 RNA5SP423-201ENST00000517127 109 ntBASIC14.93□□□□□ -0.02
SPENQ96T58 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPENQ96T58 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SPENQ96T58 TOP3BP1-201ENST00000420768 1380 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.92□□□□□ -0.02
SPENQ96T58 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.92□□□□□ -0.02
SPENQ96T58 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AL355994.2-201ENST00000447882 704 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 CYP2A7P1-201ENST00000595391 815 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPENQ96T58 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AL390961.4-201ENST00000623958 2535 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.92□□□□□ -0.02
SPENQ96T58 AC010319.3-201ENST00000597028 470 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPENQ96T58 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SPENQ96T58 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.92□□□□□ -0.02
SPENQ96T58 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.92□□□□□ -0.02
SPENQ96T58 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.91□□□□□ -0.02
SPENQ96T58 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.91□□□□□ -0.02
SPENQ96T58 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 CROCCP4-201ENST00000457096 498 ntBASIC14.91□□□□□ -0.02
SPENQ96T58 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.91□□□□□ -0.02
SPENQ96T58 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 NOC2LP1-202ENST00000452600 2235 ntBASIC14.91□□□□□ -0.02
SPENQ96T58 AC005052.1-201ENST00000625181 2492 ntBASIC14.91□□□□□ -0.02
SPENQ96T58 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
SPENQ96T58 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 TTTY23B-201ENST00000442790 549 ntBASIC14.91□□□□□ -0.02
SPENQ96T58 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SPENQ96T58 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.91□□□□□ -0.02
SPENQ96T58 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.91□□□□□ -0.02
SPENQ96T58 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 ZNF767P-206ENST00000513792 565 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.9□□□□□ -0.02
SPENQ96T58 AL589739.1-201ENST00000607720 493 ntBASIC14.9□□□□□ -0.02
SPENQ96T58 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPENQ96T58 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms