Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 CETN4P-206ENST00000642099 2168 ntBASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CDK5RAP2Q96SN8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 AC080080.1-201ENST00000625121 2420 ntBASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 AC245100.5-201ENST00000452108 331 ntBASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 SERBP1P5-201ENST00000510079 1181 ntBASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 LETM1P2-201ENST00000597330 2178 ntBASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDK5RAP2Q96SN8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 KRT8P12-202ENST00000472924 1397 ntBASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AL079307.3-201ENST00000556114 283 ntBASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 RN7SL828P-201ENST00000607615 303 ntBASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 AC008738.7-201ENST00000609744 511 ntBASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.48■□□□□ 0.71
CDK5RAP2Q96SN8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 UBALD1-205ENST00000590891 2641 ntBASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.47■□□□□ 0.71
CDK5RAP2Q96SN8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms