Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC27.24■■□□□ 1.95
IFT140Q96RY7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
IFT140Q96RY7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
IFT140Q96RY7 AC079316.1-201ENST00000548397 411 ntBASIC27.23■■□□□ 1.95
IFT140Q96RY7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
IFT140Q96RY7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 PTP4A1P2-201ENST00000546033 454 ntBASIC27.22■■□□□ 1.95
IFT140Q96RY7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 LINC01115-203ENST00000606068 577 ntBASIC27.22■■□□□ 1.95
IFT140Q96RY7 MIR6727-201ENST00000620702 65 ntBASIC27.22■■□□□ 1.95
IFT140Q96RY7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
IFT140Q96RY7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC27.22■■□□□ 1.95
IFT140Q96RY7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
IFT140Q96RY7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
IFT140Q96RY7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC27.21■■□□□ 1.95
IFT140Q96RY7 AL365330.1-201ENST00000607459 531 ntBASIC27.21■■□□□ 1.95
IFT140Q96RY7 ABBA01031663.1-201ENST00000635630 790 ntBASIC27.21■■□□□ 1.95
IFT140Q96RY7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 TUBB8P12-201ENST00000308911 1335 ntBASIC27.21■■□□□ 1.95
IFT140Q96RY7 TUBB7P-202ENST00000428444 1305 ntBASIC27.21■■□□□ 1.95
IFT140Q96RY7 TUBB8P7-204ENST00000567960 1332 ntBASIC27.21■■□□□ 1.95
IFT140Q96RY7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
IFT140Q96RY7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
IFT140Q96RY7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
IFT140Q96RY7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
IFT140Q96RY7 FO393414.2-201ENST00000405153 598 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 FXNP2-201ENST00000411625 547 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC27.2■■□□□ 1.95
IFT140Q96RY7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
IFT140Q96RY7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
IFT140Q96RY7 AL359711.2-201ENST00000563105 872 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 AC015967.2-201ENST00000624092 234 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 AC006435.4-201ENST00000625037 234 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 AL356737.1-201ENST00000634391 234 ntBASIC27.2■■□□□ 1.95
IFT140Q96RY7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
IFT140Q96RY7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
IFT140Q96RY7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC27.2■■□□□ 1.94
IFT140Q96RY7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC27.2■■□□□ 1.94
IFT140Q96RY7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC27.2■■□□□ 1.94
IFT140Q96RY7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
IFT140Q96RY7 ZBTB12BP-201ENST00000314232 1122 ntBASIC27.19■■□□□ 1.94
IFT140Q96RY7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC27.19■■□□□ 1.94
IFT140Q96RY7 AC026954.1-201ENST00000429771 1293 ntBASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms