Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 GK-202ENST00000378941 458 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 AL358472.5-202ENST00000641448 1267 ntBASIC17.74■□□□□ 0.43
CASD1Q96PB1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASD1Q96PB1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CASD1Q96PB1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 NME2P1-201ENST00000426182 414 ntBASIC17.73■□□□□ 0.43
CASD1Q96PB1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 CR383656.12-201ENST00000549567 513 ntBASIC17.73■□□□□ 0.43
CASD1Q96PB1 AL079307.3-201ENST00000556114 283 ntBASIC17.73■□□□□ 0.43
CASD1Q96PB1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 AL139011.1-202ENST00000642063 584 ntBASIC17.73■□□□□ 0.43
CASD1Q96PB1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.73■□□□□ 0.43
CASD1Q96PB1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CASD1Q96PB1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CASD1Q96PB1 AL391256.1-201ENST00000443260 1855 ntBASIC17.72■□□□□ 0.43
CASD1Q96PB1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.72■□□□□ 0.43
CASD1Q96PB1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms