Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SHDQ96IW2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHDQ96IW2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 ABALON-201ENST00000629058 1903 ntBASIC16.8■□□□□ 0.28
SHDQ96IW2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AC114501.2-201ENST00000439631 535 ntBASIC16.8■□□□□ 0.28
SHDQ96IW2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.8■□□□□ 0.28
SHDQ96IW2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SHDQ96IW2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHDQ96IW2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHDQ96IW2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHDQ96IW2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.79■□□□□ 0.28
SHDQ96IW2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 SLC25A6P5-201ENST00000435663 894 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SHDQ96IW2 AC234783.1-201ENST00000441761 496 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.79■□□□□ 0.28
SHDQ96IW2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.79■□□□□ 0.28
SHDQ96IW2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 AC092658.1-201ENST00000505836 891 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.79■□□□□ 0.28
SHDQ96IW2 AP005482.1-201ENST00000563722 1273 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.79■□□□□ 0.28
SHDQ96IW2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.79■□□□□ 0.28
SHDQ96IW2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 AC026979.3-201ENST00000607315 403 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 AL355312.1-201ENST00000407115 2176 ntBASIC16.79■□□□□ 0.28
SHDQ96IW2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SHDQ96IW2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
SHDQ96IW2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SHDQ96IW2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHDQ96IW2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.78■□□□□ 0.28
SHDQ96IW2 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.78■□□□□ 0.28
SHDQ96IW2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHDQ96IW2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.78■□□□□ 0.28
SHDQ96IW2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.78■□□□□ 0.28
SHDQ96IW2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms