Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 CXCL1P1-201ENST00000502804 216 ntBASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AC093909.1-201ENST00000504731 1122 ntBASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PDLIM5Q96HC4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 LINC01144-201ENST00000626198 1710 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 DOC2GP-204ENST00000639052 2548 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 AC098831.1-202ENST00000438821 336 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 AC108751.1-201ENST00000490852 363 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 IGHV3-22-201ENST00000520721 359 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 AP001005.1-201ENST00000571755 1248 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SLC25A6P4-201ENST00000586535 553 ntBASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PDLIM5Q96HC4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 TPM4P1-201ENST00000436100 807 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 VN2R19P-201ENST00000442399 1052 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 AC009947.1-201ENST00000444350 727 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 UNC93B6-202ENST00000528242 690 ntBASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PDLIM5Q96HC4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms