Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 AC140113.2-201ENST00000604370 208 ntBASIC17.36■□□□□ 0.37
IFT43Q96FT9 AL139424.1-201ENST00000607572 797 ntBASIC17.36■□□□□ 0.37
IFT43Q96FT9 AC092053.1-201ENST00000605787 1936 ntBASIC17.36■□□□□ 0.37
IFT43Q96FT9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 AC060834.1-201ENST00000443027 2032 ntBASIC17.35■□□□□ 0.37
IFT43Q96FT9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 MIR1233-2-201ENST00000408138 82 ntBASIC17.35■□□□□ 0.37
IFT43Q96FT9 MIR1233-1-201ENST00000408722 82 ntBASIC17.35■□□□□ 0.37
IFT43Q96FT9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 UNC93B6-202ENST00000528242 690 ntBASIC17.35■□□□□ 0.37
IFT43Q96FT9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 AL356488.2-201ENST00000602755 427 ntBASIC17.35■□□□□ 0.37
IFT43Q96FT9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFT43Q96FT9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IFT43Q96FT9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AC124947.2-201ENST00000547118 1133 ntBASIC17.34■□□□□ 0.37
IFT43Q96FT9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AP002414.3-201ENST00000589352 1468 ntBASIC17.34■□□□□ 0.37
IFT43Q96FT9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AC004706.3-202ENST00000621574 984 ntBASIC17.34■□□□□ 0.37
IFT43Q96FT9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFT43Q96FT9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
IFT43Q96FT9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.37
IFT43Q96FT9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms