Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF31Q96EP0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF31Q96EP0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 AC254562.1-201ENST00000417586 456 ntBASIC16.22■□□□□ 0.19
RNF31Q96EP0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 FAM185BP-201ENST00000443595 716 ntBASIC16.22■□□□□ 0.19
RNF31Q96EP0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.22■□□□□ 0.19
RNF31Q96EP0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 LINC02084-201ENST00000606069 1096 ntBASIC16.22■□□□□ 0.19
RNF31Q96EP0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF31Q96EP0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF31Q96EP0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 AC004461.1-201ENST00000412461 403 ntBASIC16.21■□□□□ 0.19
RNF31Q96EP0 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 CYMP-203ENST00000474680 1263 ntBASIC16.21■□□□□ 0.19
RNF31Q96EP0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.19
RNF31Q96EP0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 AP002472.1-201ENST00000577490 586 ntBASIC16.21■□□□□ 0.19
RNF31Q96EP0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 LINC01451-201ENST00000623792 534 ntBASIC16.21■□□□□ 0.19
RNF31Q96EP0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF31Q96EP0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF31Q96EP0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF31Q96EP0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.21■□□□□ 0.18
RNF31Q96EP0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF31Q96EP0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF31Q96EP0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF31Q96EP0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF31Q96EP0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RNF31Q96EP0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms