Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APH1AQ96BI3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.88□□□□□ -0.03
APH1AQ96BI3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.87□□□□□ -0.03
APH1AQ96BI3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APH1AQ96BI3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APH1AQ96BI3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 AC006277.1-201ENST00000624348 1610 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 LINC00895-201ENST00000629028 1637 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 HMGA1P7-201ENST00000406908 502 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 AC013467.2-201ENST00000605472 835 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.86□□□□□ -0.03
APH1AQ96BI3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APH1AQ96BI3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APH1AQ96BI3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
APH1AQ96BI3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APH1AQ96BI3 AC112191.1-201ENST00000523689 701 ntBASIC14.85□□□□□ -0.03
APH1AQ96BI3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms