Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
SH3KBP1Q96B97 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 AC112482.1-201ENST00000492080 688 ntBASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3KBP1Q96B97 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 NKILA-202ENST00000614771 2598 ntBASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 RHOQP3-201ENST00000437982 621 ntBASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 PAWRP1-201ENST00000451083 565 ntBASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 CXCL1P1-201ENST00000502804 216 ntBASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 AC129492.6-201ENST00000611383 1305 ntBASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3KBP1Q96B97 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 AC011676.5-201ENST00000624864 2660 ntBASIC16.64■□□□□ 0.26
SH3KBP1Q96B97 EGFEM1P-202ENST00000431685 1563 ntBASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 AL121761.2-201ENST00000598007 1648 ntBASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 AC018845.2-201ENST00000568326 409 ntBASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 AC005829.1-201ENST00000570002 483 ntBASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3KBP1Q96B97 AC023141.13-201ENST00000604991 943 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms