Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 KRT8P49-201ENST00000604166 1432 ntBASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 AC140113.3-201ENST00000605663 199 ntBASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 CDC14C-201ENST00000428251 1719 ntBASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.72■□□□□ 0.27
CKAP2Q8WWK9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 STARP1-201ENST00000397973 869 ntBASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CKAP2Q8WWK9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CKAP2Q8WWK9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 LINC02447-202ENST00000501888 2146 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AP002414.1-201ENST00000391405 1147 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 KLF4P1-201ENST00000412782 1185 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AL441883.1-201ENST00000566170 1045 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 AL671710.1-201ENST00000610245 2349 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 FAM45BP-202ENST00000592932 1624 ntBASIC16.7■□□□□ 0.26
CKAP2Q8WWK9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms