Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL353593.2-201ENST00000602529 1483 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 AC063926.3-201ENST00000624734 5658 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 AC112504.1-201ENST00000623415 1841 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 HMGA1P5-201ENST00000412453 271 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 AC013467.2-201ENST00000605472 835 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 AC073912.3-201ENST00000624414 853 ntBASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM4Q8WVI0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 ECEL1P3-201ENST00000427961 737 ntBASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 GPR32P1-201ENST00000601788 811 ntBASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 FAM87A-204ENST00000613235 858 ntBASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM4Q8WVI0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 AC006277.1-201ENST00000624348 1610 ntBASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM4Q8WVI0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms