Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.19■□□□□ 0.66
U2AF1L4Q8WU68 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ALG1L8P-201ENST00000533887 760 ntBASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 MIR4515-201ENST00000584082 81 ntBASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2AF1L4Q8WU68 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC107918.2-201ENST00000530817 355 ntBASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2AF1L4Q8WU68 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 AC108860.2-201ENST00000562760 2183 ntBASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 AC012313.1-201ENST00000593393 3059 ntBASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2AF1L4Q8WU68 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms