Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 REXO1L8P-201ENST00000604378 1897 ntBASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 AL355802.2-201ENST00000402069 882 ntBASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 AP005242.2-201ENST00000580065 1175 ntBASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.85□□□□□ -0.03
DYNC2LI1Q8TCX1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 CD177P1-201ENST00000606252 935 ntBASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 CICP23-201ENST00000605013 2741 ntBASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DYNC2LI1Q8TCX1 AC139749.1-202ENST00000617529 3139 ntBASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DYNC2LI1Q8TCX1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms