Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC142381.1-201ENST00000426099 345 ntBASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AC245100.3-201ENST00000441281 285 ntBASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AC003101.2-201ENST00000612557 442 ntBASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 IGHV3-72-202ENST00000621503 303 ntBASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNIP1Q8TAD8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 PRORSD1P-202ENST00000563365 2154 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 MIR1909-201ENST00000411312 80 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AP006294.1-201ENST00000415407 339 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ACA64.2-201ENST00000459014 129 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AC105233.2-201ENST00000523697 349 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AF228730.5-201ENST00000530288 346 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AC106886.1-201ENST00000568660 600 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AC016027.1-202ENST00000607927 1699 ntBASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNIP1Q8TAD8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AL035456.1-201ENST00000456064 1369 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC087499.5-201ENST00000452760 1342 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC079776.1-201ENST00000401540 1152 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AL512384.1-201ENST00000406683 331 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 INE1-201ENST00000456273 945 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC009407.1-201ENST00000568958 598 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AC008738.7-201ENST00000609744 511 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms