Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AC067930.6-201ENST00000623257 4947 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AC243591.1-201ENST00000452967 1364 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AC132008.2-207ENST00000454517 770 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 DUX4L17-201ENST00000557360 1267 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 TERC-201ENST00000602385 541 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AL353135.1-201ENST00000606729 504 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AC092119.3-201ENST00000612618 583 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AL022326.1-202ENST00000641533 845 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS37AQ8NEZ2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 AL590787.1-201ENST00000568856 1315 ntBASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS37AQ8NEZ2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS37AQ8NEZ2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms