Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.86■□□□□ 0.93
CARMIL3Q8ND23 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC022494.1-201ENST00000466044 728 ntBASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC073439.1-201ENST00000624121 1774 ntBASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 RPL37AP1-201ENST00000412502 279 ntBASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.85■□□□□ 0.93
CARMIL3Q8ND23 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 AL080243.2-201ENST00000418783 582 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 MTND6P24-201ENST00000440466 518 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 AL589739.1-201ENST00000607720 493 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CARMIL3Q8ND23 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 AC138969.3-201ENST00000546612 1459 ntBASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 AC138932.2-201ENST00000548268 1459 ntBASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 AC126755.4-201ENST00000549796 1459 ntBASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 AC108860.2-201ENST00000562760 2183 ntBASIC20.83■□□□□ 0.93
CARMIL3Q8ND23 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 AC079776.1-201ENST00000401540 1152 ntBASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 RN7SL828P-201ENST00000607615 303 ntBASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.83■□□□□ 0.92
CARMIL3Q8ND23 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms