Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 SERBP1P5-201ENST00000510079 1181 ntBASIC17■□□□□ 0.31
SYNPOQ8N3V7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AC108860.2-201ENST00000562760 2183 ntBASIC17■□□□□ 0.31
SYNPOQ8N3V7 SPDYE22P-201ENST00000582158 798 ntBASIC17■□□□□ 0.31
SYNPOQ8N3V7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AC100757.3-201ENST00000622361 1406 ntBASIC17■□□□□ 0.31
SYNPOQ8N3V7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPOQ8N3V7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPOQ8N3V7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AC016027.1-202ENST00000607927 1699 ntBASIC17■□□□□ 0.31
SYNPOQ8N3V7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17■□□□□ 0.31
SYNPOQ8N3V7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AL662799.1-202ENST00000614205 422 ntBASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AC007967.4-201ENST00000614700 386 ntBASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AC025048.6-201ENST00000634326 1161 ntBASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 AC131009.4-201ENST00000624048 1740 ntBASIC16.99■□□□□ 0.31
SYNPOQ8N3V7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 EGFEM1P-202ENST00000431685 1563 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 MRPS18AP1-201ENST00000414458 589 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 RARRES2P9-201ENST00000565168 469 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 MPDU1-223ENST00000582151 728 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 AC073389.1-201ENST00000595595 795 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 AC141586.5-201ENST00000624546 2050 ntBASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SYNPOQ8N3V7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC133963.1-201ENST00000504166 1679 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms