Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
VRK2Q86Y07 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VRK2Q86Y07 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SNX33P1-201ENST00000592116 1762 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 RPS2P1-201ENST00000434010 821 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SLC25A6P2-201ENST00000497974 877 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AC006557.2-201ENST00000592985 1240 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 REXO1L3P-201ENST00000622202 1288 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AL805961.1-202ENST00000641562 540 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 AF228730.7-201ENST00000641842 219 ntBASIC15.54■□□□□ 0.08
VRK2Q86Y07 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VRK2Q86Y07 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VRK2Q86Y07 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 LINC02199-201ENST00000506655 2702 ntBASIC15.53■□□□□ 0.08
VRK2Q86Y07 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AL671710.1-201ENST00000610245 2349 ntBASIC15.53■□□□□ 0.08
VRK2Q86Y07 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 MPDU1-223ENST00000582151 728 ntBASIC15.53■□□□□ 0.08
VRK2Q86Y07 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 AL139011.1-202ENST00000642063 584 ntBASIC15.53■□□□□ 0.08
VRK2Q86Y07 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VRK2Q86Y07 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VRK2Q86Y07 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms