Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC022494.1-201ENST00000466044 728 ntBASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC055876.2-201ENST00000531834 546 ntBASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC024267.1-201ENST00000582320 895 ntBASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 MIR6799-201ENST00000620297 69 ntBASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 MIR1909-201ENST00000411312 80 ntBASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 SPDYE18-201ENST00000510091 1050 ntBASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 MIR6805-201ENST00000615055 62 ntBASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CNKSR3Q6P9H4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 RPS2P32-201ENST00000439199 892 ntBASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CNKSR3Q6P9H4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 KRT8P12-202ENST00000472924 1397 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 AC112492.5-201ENST00000421897 457 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 KRT17P8-201ENST00000540749 863 ntBASIC17.84■□□□□ 0.45
CNKSR3Q6P9H4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms