Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 AC243591.1-201ENST00000452967 1364 ntBASIC17.18■□□□□ 0.34
CASC4Q6P4E1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CASC4Q6P4E1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 NCF1C-201ENST00000438382 1427 ntBASIC17.17■□□□□ 0.34
CASC4Q6P4E1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 MIR3652-201ENST00000579335 131 ntBASIC17.17■□□□□ 0.34
CASC4Q6P4E1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 AC064862.7-201ENST00000604520 867 ntBASIC17.17■□□□□ 0.34
CASC4Q6P4E1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 AL022326.1-202ENST00000641533 845 ntBASIC17.17■□□□□ 0.34
CASC4Q6P4E1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 AC092364.2-201ENST00000596710 2692 ntBASIC17.17■□□□□ 0.34
CASC4Q6P4E1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CASC4Q6P4E1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AC008894.3-201ENST00000624324 3103 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AC006449.5-201ENST00000610658 2098 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AP002414.1-201ENST00000391405 1147 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 HCG4P8-203ENST00000443049 980 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AC106795.1-205ENST00000512851 1056 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 NKAPP1-205ENST00000585790 367 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AL353135.1-201ENST00000606729 504 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms