Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SSRP1Q08945 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 AL118508.1-201ENST00000613502 2345 ntBASIC19.47■□□□□ 0.71
SSRP1Q08945 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SSRP1Q08945 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
SSRP1Q08945 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSRP1Q08945 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.46■□□□□ 0.71
SSRP1Q08945 AC012569.1-201ENST00000591191 1524 ntBASIC19.46■□□□□ 0.71
SSRP1Q08945 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSRP1Q08945 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSRP1Q08945 AL513480.1-201ENST00000451731 511 ntBASIC19.46■□□□□ 0.71
SSRP1Q08945 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.46■□□□□ 0.71
SSRP1Q08945 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.46■□□□□ 0.71
SSRP1Q08945 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SSRP1Q08945 BX640515.1-201ENST00000617215 977 ntBASIC19.46■□□□□ 0.71
SSRP1Q08945 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.46■□□□□ 0.71
SSRP1Q08945 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.46■□□□□ 0.71
SSRP1Q08945 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSRP1Q08945 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
SSRP1Q08945 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSRP1Q08945 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.46■□□□□ 0.71
SSRP1Q08945 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.45■□□□□ 0.7
SSRP1Q08945 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.45■□□□□ 0.7
SSRP1Q08945 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.45■□□□□ 0.7
SSRP1Q08945 MIR4515-201ENST00000584082 81 ntBASIC19.45■□□□□ 0.7
SSRP1Q08945 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSRP1Q08945 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.45■□□□□ 0.7
SSRP1Q08945 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SSRP1Q08945 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSRP1Q08945 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
SSRP1Q08945 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.44■□□□□ 0.7
SSRP1Q08945 AC120114.3-201ENST00000611923 658 ntBASIC19.44■□□□□ 0.7
SSRP1Q08945 AL512652.2-201ENST00000625156 1716 ntBASIC19.44■□□□□ 0.7
SSRP1Q08945 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.44■□□□□ 0.7
SSRP1Q08945 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSRP1Q08945 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.44■□□□□ 0.7
SSRP1Q08945 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SSRP1Q08945 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.43■□□□□ 0.7
SSRP1Q08945 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.43■□□□□ 0.7
SSRP1Q08945 AC096734.2-201ENST00000562054 433 ntBASIC19.43■□□□□ 0.7
SSRP1Q08945 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.43■□□□□ 0.7
SSRP1Q08945 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.43■□□□□ 0.7
SSRP1Q08945 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 AC010507.1-201ENST00000633895 436 ntBASIC19.43■□□□□ 0.7
SSRP1Q08945 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSRP1Q08945 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms