Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 HCG4-201ENST00000418983 998 ntBASIC14.68□□□□□ -0.06
HIST1H3AP68431 AC108073.2-201ENST00000464002 357 ntBASIC14.68□□□□□ -0.06
HIST1H3AP68431 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 AC117500.6-201ENST00000624871 588 ntBASIC14.68□□□□□ -0.06
HIST1H3AP68431 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PRSS29P-201ENST00000440800 595 ntBASIC14.67□□□□□ -0.06
HIST1H3AP68431 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 AC087641.1-201ENST00000557561 1021 ntBASIC14.67□□□□□ -0.06
HIST1H3AP68431 AL049840.3-201ENST00000602669 611 ntBASIC14.67□□□□□ -0.06
HIST1H3AP68431 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 AC004790.2-201ENST00000623588 572 ntBASIC14.67□□□□□ -0.06
HIST1H3AP68431 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 GGT3P-204ENST00000453783 1664 ntBASIC14.67□□□□□ -0.06
HIST1H3AP68431 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H3AP68431 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H3AP68431 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 ME2P1-201ENST00000426028 1970 ntBASIC14.66□□□□□ -0.06
HIST1H3AP68431 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 MRPL3P1-201ENST00000400109 1033 ntBASIC14.66□□□□□ -0.06
HIST1H3AP68431 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 FAM185BP-201ENST00000443595 716 ntBASIC14.66□□□□□ -0.06
HIST1H3AP68431 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H3AP68431 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H3AP68431 AC010654.1-201ENST00000615722 808 ntBASIC14.66□□□□□ -0.06
HIST1H3AP68431 AP001350.2-201ENST00000625104 1094 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms