Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBA52P62987 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBA52P62987 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.57□□□□□ -0.08
UBA52P62987 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.57□□□□□ -0.08
UBA52P62987 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.57□□□□□ -0.08
UBA52P62987 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBA52P62987 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
UBA52P62987 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.57□□□□□ -0.08
UBA52P62987 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBA52P62987 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBA52P62987 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
UBA52P62987 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
UBA52P62987 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.56□□□□□ -0.08
UBA52P62987 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.56□□□□□ -0.08
UBA52P62987 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 RNPS1P1-201ENST00000507437 918 ntBASIC14.56□□□□□ -0.08
UBA52P62987 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.56□□□□□ -0.08
UBA52P62987 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.56□□□□□ -0.08
UBA52P62987 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
UBA52P62987 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UBA52P62987 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBA52P62987 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UBA52P62987 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBA52P62987 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBA52P62987 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms