Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.65■□□□□ 0.42
USP46P62068 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.65■□□□□ 0.42
USP46P62068 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.65■□□□□ 0.42
USP46P62068 AC087641.1-201ENST00000557561 1021 ntBASIC17.65■□□□□ 0.42
USP46P62068 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP46P62068 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.65■□□□□ 0.42
USP46P62068 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
USP46P62068 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
USP46P62068 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USP46P62068 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.65■□□□□ 0.42
USP46P62068 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
USP46P62068 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USP46P62068 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP46P62068 OR6D1P-202ENST00000641007 5290 ntBASIC17.64■□□□□ 0.42
USP46P62068 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP46P62068 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
USP46P62068 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
USP46P62068 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP46P62068 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
USP46P62068 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP46P62068 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.64■□□□□ 0.41
USP46P62068 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
USP46P62068 RNU1-129P-201ENST00000384064 167 ntBASIC17.64■□□□□ 0.41
USP46P62068 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.64■□□□□ 0.41
USP46P62068 TIMM8BP1-201ENST00000452384 211 ntBASIC17.64■□□□□ 0.41
USP46P62068 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.64■□□□□ 0.41
USP46P62068 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.64■□□□□ 0.41
USP46P62068 U1.21-201ENST00000580816 167 ntBASIC17.64■□□□□ 0.41
USP46P62068 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.64■□□□□ 0.41
USP46P62068 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
USP46P62068 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.64■□□□□ 0.41
USP46P62068 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.64■□□□□ 0.41
USP46P62068 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP46P62068 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP46P62068 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP46P62068 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.64■□□□□ 0.41
USP46P62068 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.63■□□□□ 0.41
USP46P62068 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
USP46P62068 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.63■□□□□ 0.41
USP46P62068 CYP2A7P1-201ENST00000595391 815 ntBASIC17.63■□□□□ 0.41
USP46P62068 AC026120.1-201ENST00000611536 926 ntBASIC17.63■□□□□ 0.41
USP46P62068 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 AC060834.1-201ENST00000443027 2032 ntBASIC17.63■□□□□ 0.41
USP46P62068 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP46P62068 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.63■□□□□ 0.41
USP46P62068 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.63■□□□□ 0.41
USP46P62068 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
USP46P62068 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms