Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.12□□□□□ -0.31
ERVFC1-1P60608 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SLC25A1P3-201ENST00000395415 828 ntBASIC13.11□□□□□ -0.31
ERVFC1-1P60608 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.11□□□□□ -0.31
ERVFC1-1P60608 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SLC25A1P4-201ENST00000567977 778 ntBASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC010240.3-201ENST00000607688 395 ntBASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC133561.5-201ENST00000635547 218 ntBASIC13.11□□□□□ -0.31
ERVFC1-1P60608 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ERVFC1-1P60608 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 HLA-A-202ENST00000376806 1854 ntBASIC13.1□□□□□ -0.31
ERVFC1-1P60608 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 FAM197Y1-201ENST00000421178 764 ntBASIC13.1□□□□□ -0.31
ERVFC1-1P60608 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AP003071.4-201ENST00000562276 1284 ntBASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.1□□□□□ -0.31
ERVFC1-1P60608 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms